PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016512401.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 433aa    MW: 49270.6 Da    PI: 4.1818
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016512401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.55.7e-1981482128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgk 88 
                       GfrF+Ptd+e +  +L + v+g++++   +  ++vd+y k ePw++  +   + + e++  y +F+++ kk++ + r +r + ++g+Wk+  k
  XP_016512401.1   8 EDGFRFRPTDSEGL-MFLLRFVAGQEMHDYGFiTTNVDVYgKQEPWEIYdNgvpCGDDEDSTSYrYFITKLKKKS-NARYHRsVGNKGTWKQDAK 100
                     57**********99.7899999999988878735677*99456*****744555333344444424444444444.5677775888********* PP

             NAM  89 dkevlsk......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128
                     dk+v+ k      +  +  +g k+ L + ++    ++ +  +W+m+ey+l
  XP_016512401.1 101 DKPVHYKnmgntsS--VvnIGSKTCLSYKNKkfYPEDQKDGHWLMKEYKL 148
                     *****996655433..156*********95522455566789******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-175169IPR003441NAC domain
PROSITE profilePS5100522.9997171IPR003441NAC domain
PfamPF023657.1E-129148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MDQHLKLEDG FRFRPTDSEG LMFLLRFVAG QEMHDYGFIT TNVDVYGKQE PWEIYDNGVP  60
CGDDEDSTSY RYFITKLKKK SNARYHRSVG NKGTWKQDAK DKPVHYKNMG NTSSVVNIGS  120
KTCLSYKNKK FYPEDQKDGH WLMKEYKLSK VILHKFDEER RDYVLCAIKN LNHVNSSSET  180
FTITALNNIS DGTDEVTSSV DGLLATKNCK DYYNMCKNLE HSETMAFQES MVMNNSVDEA  240
AEGTTFEMPE LEVPEDLYQW DGKELDELNQ ILDGVPEVDV AVEPLAAVEP EATYTTWGQH  300
SVEATCMPNL DPSMPTYTAH IEYSEVADMS QIHLEHYSAT MAFQESHEAV ESMVMNNSVE  360
PTEGTTFEVP ELQVPDDLYQ CDGKEFDEQN QILYDVPEVD VEVNIAERLA ATMEPTEATY  420
PAEATDMLNV DQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016512401.10.0PREDICTED: protein NTM1-like 9, partial
TrEMBLA0A1S4DGC10.0A0A1S4DGC1_TOBAC; protein NTM1-like 9
STRINGXP_009621726.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-13NAC domain containing protein 32