PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016510539.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 231aa MW: 24011.3 Da PI: 10.0628

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016510539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	114.1	2.1e-35	17	113	6	96
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.....eeaeaagssasaspesslq 95 ++++ E+E++k RER+RRai++ki+ GLR++G+y+l r+D+n+Vl+ L+ eAGw+v++DGttyr +s+ + + ++g+s+ a+p+ss+ XP_016510539.1 17 RRSAVEKEKTKMRERQRRAITTKIFNGLRKHGGYRLSPRSDINQVLRHLASEAGWIVDPDGTTYRSSSSSTnnnscPHCGVGGKSNAATPTSSTV 111 46778************************************************************887777544434445677888888888876 PP DUF822 96 .s 96 + XP_016510539.1 112 gH 113 32 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.5E-32	18	168	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MKESAAGQQR SNNSNGRRSA VEKEKTKMRE RQRRAITTKI FNGLRKHGGY RLSPRSDINQ 60 VLRHLASEAG WIVDPDGTTY RSSSSSTNNN SCPHCGVGGK SNAATPTSST VGHTSGGGGE 120 CSTTASPLRA TANCGDTKTT YSRTPATNLF DSGFSLSGAV STSALLSSTS SDTLFSIYMS 180 GACGGAGVGG ISGVYHPSSA ASATVRHQEQ PSYLLQEVRA SNQNTPVGSP L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016510533.1	1e-169	PREDICTED: beta-amylase 7-like isoform X1
Refseq	XP_016510539.1	1e-169	PREDICTED: beta-amylase 7-like isoform X1
TrEMBL	A0A1S4DAZ8	1e-167	A0A1S4DAZ8_TOBAC; beta-amylase 7-like isoform X1
STRING	XP_009783609.1	1e-167	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	3e-20	beta-amylase 7