PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016510026.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 306aa MW: 34934.6 Da PI: 5.8584

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016510026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.5	2.2e-11	176	220	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L ++ XP_016510026.1 176 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRV 220 999*********************************988776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.9E-13	172	236	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.576	174	226	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.7E-10	176	220	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.7E-12	176	227	No hit	No description
SuperFamily	SSF57959	1.05E-11	176	230	No hit	No description
CDD	cd14703	1.58E-21	177	227	No hit	No description
PROSITE pattern	PS00036	0	179	194	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MAHLPPRVPN MTSNWPDFSH HHQKIDTTTT AVHNPSWVDE FLDFSSTKRG SHRRSISDSI 60 AFLEAPMVEE CRRLSTPGKT SGSEFERFDD EQLMSMFNDD IANNPSSPSD NNSINEEKKM 120 STIISTDEQE MQQQQQQQLK TEPEEVESSC KSDEQTASDQ HATADNNSSE KINDPKRIKR 180 ILANRQSAQR SRVRKLQYIS ELERSVTTLQ AEVSVLSPRV AFLDHQRLVL NVDNSVLKQR 240 IAALAQDKIF KDAHQEALKR EIERLRQIYY QQNLKKMEDG TPTPQSKSQP TAADANASEQ 300 KEQLVN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016510026.1	0.0	PREDICTED: basic leucine zipper 61-like
Swissprot	Q9M2K4	1e-108	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A1S4D9G5	0.0	A0A1S4D9G5_TOBAC; basic leucine zipper 61-like
STRING	XP_009629315.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1775	24	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	1e-102	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]