PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016506818.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 156aa    MW: 17545 Da    PI: 8.9785
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016506818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.51e-101071401655
             AP2  16 vAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     v   rdp    +r +r++lg+f tae+Aa+a+++a+ +++g
  XP_016506818.1 107 V---RDP----RRaARVWLGTFNTAEDAARAYDKAAIEFRG 140
                     3...554....357************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.3352148IPR001471AP2/ERF domain
PfamPF008471.1E-6104140IPR001471AP2/ERF domain
SMARTSM003802.7E-13105154IPR001471AP2/ERF domain
CDDcd000188.14E-18106147No hitNo description
Gene3DG3DSA:3.30.730.108.1E-19107148IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-12107148IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MTQKTDSLCD PQSDYAATEW ATEKLISAKY FLSTPQRTVQ FGIMESGVLG KTLRGLTKRM  60
SKIRVRTSTG ATPYLLVYNT EVVIPAEVEI PSLRIIQEAE LSDAEWVRDP RRAARVWLGT  120
FNTAEDAARA YDKAAIEFRG PRAKLNFSFA DYTSIQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2740223e-60AB274022.1 Nicotiana tabacum WRAF2 mRNA for wound-responsive AP2 like factor 2, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016506818.11e-112PREDICTED: ethylene-responsive transcription factor CRF1-like
TrEMBLA0A1S4D0H71e-111A0A1S4D0H7_TOBAC; ethylene-responsive transcription factor CRF1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.16e-14redox responsive transcription factor 1