PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016505654.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 324aa    MW: 34962.9 Da    PI: 7.7787
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016505654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822209.11.2e-6421451148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r p+wkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGtty+kg+kp e+++++g sas++p+ss+q
  XP_016505654.1   2 TSGTRLPSWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWIVEEDGTTYKKGCKPVERMDIIGYSASVNPCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                             +sp +sy++sp+sssfpsp+s+  + ++++    +sl+p+l++ls+ ss
  XP_016505654.1  97 --------PSPGASYNPSPASSSFPSPVSSHYVANTQNnsdpNSLIPWLKNLSSGSS 145
                     ........99*****************9998887766668889********998443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-654141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MTSGTRLPSW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY KKGCKPVERM DIIGYSASVN PCSSYQPSPG ASYNPSPASS SFPSPVSSHY  120
VANTQNNSDP NSLIPWLKNL SSGSSPSSSK FPHHLYIPGS SISAPVTPPL SSPTARTPRM  180
SDDPAANSTS WVQQHYAFLP SSTPASPGCQ TPPDSGWLSG VQTPQDEPSS PTFSLVSPNP  240
FGFKEPLSYG GSRMWTLGQS GTCSPAIGAG IDRTADIPMS DAISAEFAFG SNMKGLVKPW  300
EGERIHEECV TDDLELTLGN SSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754420.0HG975442.1 Solanum pennellii chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016505654.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-130BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S4CXA80.0A0A1S4CXA8_TOBAC; BES1/BZR1 homolog protein 4-like
STRINGXP_009590977.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-116BES1/BZR1 homolog 4