PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016505493.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 270aa MW: 30833.3 Da PI: 8.1814 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.7 | 9.2e-53 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++PwdLp + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_016505493.1 8 LPPGFRFHPTDEELVMHYLCRKCASQPIAV-PIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGNGYWKATGADKPIGH- 100 79**************************99.88***************6555679*************************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy g+apkgekt+W+mheyrl XP_016505493.1 101 -PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL 132 .789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.15E-64 | 3 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.629 | 8 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.2E-28 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MAAVELQLPP GFRFHPTDEE LVMHYLCRKC ASQPIAVPII AEIDLYKYDP WDLPGLALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGNGYWK ATGADKPIGH PKPVGIKKAL VFYAGKAPKG 120 EKTNWIMHEY RLAHVDRSAR NKNNSLRLDD WVLCRIYNKK GTMEKNQLNS RKMNVGMSPP 180 ASEVDVKPEI LPLPISTRPS QVLSSEFTCE REVQSEPKLS DWEKTALDLQ FNYMDAIPDV 240 GDNGLLGSQF QGCYEMSPLQ DIFMYLQKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-82 | 2 | 165 | 9 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016505493.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like isoform X2 | ||||
Swissprot | Q39013 | 1e-124 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A1S4CWI4 | 0.0 | A0A1S4CWI4_TOBAC; NAC domain-containing protein 2-like isoform X2 | ||||
STRING | XP_009795736.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-126 | NAC family protein |