PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016504834.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 296aa    MW: 33551.5 Da    PI: 5.3649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016504834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-1995144255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  XP_016504834.1  95 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAAIAYDEAALRFKG 144
                     8********.**********94....45************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.29E-2294153No hitNo description
Gene3DG3DSA:3.30.730.102.4E-3295153IPR001471AP2/ERF domain
PfamPF008476.3E-1395144IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2295153IPR016177DNA-binding domain
SMARTSM003806.9E-3795158IPR001471AP2/ERF domain
PROSITE profilePS5103225.01495152IPR001471AP2/ERF domain
PRINTSPR003672.8E-1196107IPR001471AP2/ERF domain
PRINTSPR003672.8E-11118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MERGDFSSNE MEMEEKENND NIDDPQLQEE LYNIYSARSQ HDMSAMVSVL SQVIGNSTTH  60
SSSANATPLT LPQSAVALQN QSQSIEDQGN SRRKRYRGVR QRPWGKWAAE IRDPKKAARV  120
WLGTFETAEA AAIAYDEAAL RFKGNKAKLN FPERVQGKFQ YLTTTTSQNH HLPDNIVQQQ  180
YIPTSSNNNH PLPCQEHYPS LHHYAQLLQS DSNITDLNFG ISPSYNQQLS ASFDFAQSSS  240
NSTLSELPAS YEQRQLQSSY KQEEEVLMRF SSHFGTTSSS SGPHESNWEE FEDRKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-2794155163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016504834.10.0PREDICTED: ethylene-responsive transcription factor ERF113-like isoform X1
TrEMBLA0A1S4CV080.0A0A1S4CV08_TOBAC; ethylene-responsive transcription factor ERF113-like isoform X1
STRINGXP_009587768.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.18e-40ERF family protein