PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016504593.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 111aa    MW: 12847.5 Da    PI: 6.6857
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016504593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.67.7e-252778155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kpr rWt e H++Fveav++LG   +AtPk+i++lm+ +++t  h+kSHLQkYR 
  XP_016504593.1 27 KPRFRWTVEVHDHFVEAVNELG---EATPKNIMKLMDDEDITSGHIKSHLQKYRQ 78
                    79*******************4...79***************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.4E-242679IPR009057Homeodomain-like
SuperFamilySSF466892.33E-142679IPR009057Homeodomain-like
TIGRFAMsTIGR015578.8E-202779IPR006447Myb domain, plants
PfamPF002492.3E-63177IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MEEISKEQKG EETSEKAVVQ SHDLNRKPRF RWTVEVHDHF VEAVNELGEA TPKNIMKLMD  60
DEDITSGHIK SHLQKYRQSK DIISTPKTSK GKFSITYTPS VPIYVNLFDW A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-162780157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-162780157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-162780157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-162780157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-162780258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016504593.12e-78PREDICTED: probable transcription factor KAN3 isoform X2
TrEMBLA0A1S4CU025e-77A0A1S4CU02_TOBAC; probable transcription factor KAN3 isoform X2
STRINGXP_009765181.12e-51(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.32e-19myb-related protein 1