PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016504445.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 388aa    MW: 42509.6 Da    PI: 7.3615
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016504445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.2e-184191256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g+
  XP_016504445.1 41 RYRGVRRRP-WGRYAAEIRDPQ----SkERKWLGTFDTAEEAACAYDCAARAMRGA 91
                    59*******.**********93....35*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.72E-304197No hitNo description
Gene3DG3DSA:3.30.730.101.3E-294197IPR001471AP2/ERF domain
PROSITE profilePS5103222.0364198IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-214198IPR016177DNA-binding domain
SMARTSM003807.0E-3341104IPR001471AP2/ERF domain
PfamPF008471.7E-114190IPR001471AP2/ERF domain
PRINTSPR003671.7E-94253IPR001471AP2/ERF domain
PRINTSPR003671.7E-96480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MQDAIKPLQT NISSTLFKRC GTNKRPLKDR AAGGGGGVTM RYRGVRRRPW GRYAAEIRDP  60
QSKERKWLGT FDTAEEAACA YDCAARAMRG AKARTNFVYP PPAHPTTITT DSFLNIPLLN  120
YTSTKAANRY HQLCLKDLPI RQFFQSSPQK SGGDVGRKTA LEESNDSLNL LLFHEILNSS  180
SSDSSLSSNT DLNMNINITP FDEQLPLIFN RNSTNFSTSS ATFAGSSSSS LVNQSCLISP  240
PKATSYSTSS IAPMTPQKVK DDQINNSCSV DSGMDFFPTV PSDSGFLEQA LNGFFPKPTP  300
MSSDDFCAKQ SNEDVKNHLG FCIDERGAAG ISLPYFNNGF GFSQLSSLPI DQDFPVNIDQ  360
LSAENLLGDM SFHYSDLLNI LAAKMKNT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-192997271Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016504445.10.0PREDICTED: ethylene-responsive transcription factor ERF086-like
TrEMBLA0A1S4CTK60.0A0A1S4CTK6_TOBAC; ethylene-responsive transcription factor ERF086-like
STRINGXP_009776614.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-13DORNROSCHEN-like