PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_016500198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 189aa MW: 22034.8 Da PI: 7.5044 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.1 | 6.6e-07 | 166 | 186 | 5 | 25 |
CHHHCHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk 25 +r+rr++kNRe+A rsR+RK+ XP_016500198.1 166 RRQRRMIKNRESAARSRARKQ 186 69******************9 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-4 | 166 | 186 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 169 | 184 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 189 aa Download sequence Send to blast |
MNLDELAKNV MSGEEGLQFM QNPSSNSMFL ENTNHGTLCN KSSTVDENHN QEIKHYSLQP 60 QLSSTLGLED FLIRANVIKN RNKFDDQPQM EPKFYQQIND MMMPMPIQCY SDIGFENHQS 120 MDVVNNYSEK TTNMAMTTVT TSNDCYLSGE RKRTFANEKM EKNIERRQRR MIKNRESAAR 180 SRARKQVEK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_009602332.1 | 1e-140 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_016500198.1 | 1e-140 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A1S4CGD6 | 1e-139 | A0A1S4CGD6_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
STRING | XP_009602332.1 | 1e-140 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18206 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 5e-12 | ABA-responsive element binding protein 3 |