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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016499643.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
AP2 |
Protein Properties |
Length: 441aa MW: 48933.9 Da PI: 6.759 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016499643.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.4 | 3e-17 | 148 | 197 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
XP_016499643.1 148 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 197
78*******************......55************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 441 aa
Download sequence Send
to blast |
MFDLNLGFEE FAMDDDTVHV SYDTATSEKL RELQLENSGT SNSSIVNVET SSTAGDDDFF 60 SCSDDRRRND GFAFDILRGN DYEESEFVTK ELFPLTGGES AAAELLSPQQ WLDLSANYGG 120 PAEQRIVVVP QQRQQVKKSR RGPRSKSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT 180 AHAAARAYDR AAIKFRGLDA DINFNVADYH DDLKQMSNFT KEEFVHILRR QSTGFSRGSS 240 KYRGVTLHKC GRWEARMGQF LGKKAYDKAA IKCSGKEAVT NFELSTYEGE LSTQDDGGAS 300 HNLDLNLGIA SSSLADEQHG NTCQMHSPST TMGSKLPHRR QPLTDRPLLW NGVNTSVFPT 360 FKGTAIGKGM EVDSSPNWAR QDQHPYGGSP SVPLFSTAAS SGFANSTSAA AHQHHFSTGS 420 LPYHHSPSLA NMNFAHYYCR S
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |