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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016499158.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
BBR-BPC |
Protein Properties |
Length: 309aa MW: 34530.5 Da PI: 9.9236 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016499158.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 318.1 | 2.8e-97 | 1 | 309 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepa.aslkenlglqlmssiaerdakirernlalsekkaavaerd..........................maflqrdkala 68
md +g++ rn+g++epa + lk +lglqlmss+ e+ + r++ ++++++++++ +++ +rd++++
XP_016499158.1 1 MDGNGMNIRNWGFFEPAaTVLKGHLGLQLMSSMDEKPLFGNIRDHHHHHNHQTHQPHHptvmestnggafhhhrvcgisetpmpIEY-MRDSWVN 94
88888877********9999*************776554433333335555555555456677888999999999*******99999.9****** PP
GAGA_bind 69 ernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekk 163
+ + ++k+l++l ++ + +g++ l++t+s++s+q +++p+l + + +le+ +e+ +k+ k+q k+pk+kk
XP_016499158.1 95 H-----KDYRDKYLNVLSGNH----HYLTGYGFLPETSSAQSMQIHEQPNLVKVEPD----PQLEEVCLERDIGGLAKKRGAGKSQLLKSPKSKK 176
9.....566789999888555....57789***************888887766655....3344445555556666666666677888888888 PP
GAGA_bind 164 akkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagr 258
akk+++ +k +++++ +r++a++ks ++v+ng+++D+s +P+PvCsCtG+ +qCY+WG+GGWqSaCCtt++S yPLP++tkrrg+Riagr
XP_016499158.1 177 AKKATRI---PKVESTPSV--PRARAPRKSAEVVINGITMDISVIPIPVCSCTGVAQQCYRWGCGGWQSACCTTNLSSYPLPMNTKRRGSRIAGR 266
8777773...333344444..79************************************************************************ PP
GAGA_bind 259 KmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
KmS gaf+k+LekLa+eGy++sn++DLk +WAkHGtnkfvtir
XP_016499158.1 267 KMSLGAFTKVLEKLASEGYNFSNAIDLKPYWAKHGTNKFVTIR 309
******************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MDGNGMNIRN WGFFEPAATV LKGHLGLQLM SSMDEKPLFG NIRDHHHHHN HQTHQPHHPT 60 VMESTNGGAF HHHRVCGISE TPMPIEYMRD SWVNHKDYRD KYLNVLSGNH HYLTGYGFLP 120 ETSSAQSMQI HEQPNLVKVE PDPQLEEVCL ERDIGGLAKK RGAGKSQLLK SPKSKKAKKA 180 TRIPKVESTP SVPRARAPRK SAEVVINGIT MDISVIPIPV CSCTGVAQQC YRWGCGGWQS 240 ACCTTNLSSY PLPMNTKRRG SRIAGRKMSL GAFTKVLEKL ASEGYNFSNA IDLKPYWAKH 300 GTNKFVTIR
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