PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016493031.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 475aa MW: 52045.3 Da PI: 9.3201

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016493031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.5	4e-10	327	384	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +l + XP_016493031.1 327 KRAKRILANRQSAARSKERKLRYISELEYKVQKLQTEATTLSTQVTILQKDFTELSNL 384 9********************************************9999998888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.0E-15	323	387	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.013	325	388	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.4E-9	327	382	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.7E-11	327	383	No hit	No description
SuperFamily	SSF57959	3.59E-11	327	380	No hit	No description
CDD	cd14703	1.97E-20	328	379	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
MAQSNSKPPM SHNFGVGASH VRSLSQPSNF LNNCLPPLSP LPPSESSMMS ANANLKDASM 60 EEVDVNCQVP KVVSNFAREN VFRGSDGLPP RKGHRRSNSD VPLGFSAMIQ SSPQLMPISG 120 QRISGRAVNL GDISGREKTI DLQKQPMGLS SNGRIDVEGI GERKSRGEVT DELLFSYMNL 180 ENIEALNSSG TKDRDKGSMV SCTKVSGNES SNNEAESLLK RNGVSSQPTS LREGIKRSAD 240 ADIAPTTRHF RSLSMDSAIG SFHYGDESPK LPTYLVNHSG QLSPSNSGNE SSSQRNFDFG 300 NTEFSEAEMK KIMADERLAE IAVSDPKRAK RILANRQSAA RSKERKLRYI SELEYKVQKL 360 QTEATTLSTQ VTILQKDFTE LSNLNSELKF RVQAMEQQAQ LRDALHEALT SEVQRLKLAA 420 GELREEGRLP NGMTQQMPVK HNMFPMQRQQ PSQIQQLSVG KQTTASSASA TPASA

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

MAQSNSKPPM SHNFGVGASH VRSLSQPSNF LNNCLPPLSP LPPSESSMMS ANANLKDASM  60
EEVDVNCQVP KVVSNFAREN VFRGSDGLPP RKGHRRSNSD VPLGFSAMIQ SSPQLMPISG  120
QRISGRAVNL GDISGREKTI DLQKQPMGLS SNGRIDVEGI GERKSRGEVT DELLFSYMNL  180
ENIEALNSSG TKDRDKGSMV SCTKVSGNES SNNEAESLLK RNGVSSQPTS LREGIKRSAD  240
ADIAPTTRHF RSLSMDSAIG SFHYGDESPK LPTYLVNHSG QLSPSNSGNE SSSQRNFDFG  300
NTEFSEAEMK KIMADERLAE IAVSDPKRAK RILANRQSAA RSKERKLRYI SELEYKVQKL  360
QTEATTLSTQ VTILQKDFTE LSNLNSELKF RVQAMEQQAQ LRDALHEALT SEVQRLKLAA  420
GELREEGRLP NGMTQQMPVK HNMFPMQRQQ PSQIQQLSVG KQTTASSASA TPASA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016493030.1	0.0	PREDICTED: transcription factor RF2a-like
Refseq	XP_016493031.1	0.0	PREDICTED: transcription factor RF2a-like
TrEMBL	A0A1S4BVW7	0.0	A0A1S4BVW7_TOBAC; transcription factor RF2a-like
STRING	XP_009610158.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-90	bZIP family protein