PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016492897.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 328aa MW: 36182.8 Da PI: 9.5159

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016492897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.5	4.6e-16	258	303	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + +e XP_016492897.1 258 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLK-RQKE 303 79**************************************99.4444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PRINTS	PR00041	1.9E-6	149	164	IPR001630	cAMP response element binding (CREB) protein
Gene3D	G3DSA:1.20.5.170	1.0E-15	248	301	No hit	No description
PRINTS	PR00041	1.9E-6	253	269	IPR001630	cAMP response element binding (CREB) protein
SMART	SM00338	3.5E-13	254	322	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	256	301	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.9E-13	258	301	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-10	258	303	No hit	No description
CDD	cd14707	1.39E-23	258	303	No hit	No description
PROSITE pattern	PS00036	0	261	276	IPR004827	Basic-leucine zipper domain
PRINTS	PR00041	1.9E-6	271	291	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	1.9E-6	291	308	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MGSQGGGGGG NSMGATQAQD PKPNALARQG SLYSLTLDEV QNQLGDLGKP LSSMNLDELL 60 KTVWTVEASQ GMGGTDYGVL QHSQVASGSS LHRQSSITLT GDLCKKTVDQ VWQDIQQGQK 120 RDNSDRKIQE RQRTLGEMTL EDFLVKAGVV AEPTPGKRSS SGSDSMALPQ QQAQWSHYAM 180 PQIPPQQPQQ QNMLPVFMPG HSVQQPLAVV ANPIMDAAYP ESQMTMSPTA LLGTLSDTQT 240 LGRKRVAPED VVEKTVERRQ KRMIKNRESA ARSRARKQAY THELENKVSR LEEENERLKR 300 QKEIEKVLPS VPPPEPKYQL RRTSSAPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KF736849	0.0	KF736849.1 Nicotiana tabacum ABRE binding factor (ABF1) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016492897.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	3e-96	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1S4BVI8	0.0	A0A1S4BVI8_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_009759591.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	7e-99	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]