PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016490995.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 704aa    MW: 77229.2 Da    PI: 6.1234
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016490995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like73.82.4e-23175228155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k++l+Wt  LH++F++a++++ G ++A P+tile+m+v+gLt+e+v+SHLQkYR+
  XP_016490995.1 175 KTKLVWTDALHNKFLQAIREI-GLDRAYPRTILEVMDVPGLTRENVASHLQKYRI 228
                     689******************.********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011014.231195IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521726.12E-92194IPR011006CheY-like superfamily
CDDcd001562.58E-54295No hitNo description
Gene3DG3DSA:3.40.50.23001.2E-754102No hitNo description
PROSITE profilePS5129410.343172231IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.8E-24173232IPR009057Homeodomain-like
SuperFamilySSF466892.51E-17173232IPR009057Homeodomain-like
TIGRFAMsTIGR015576.1E-22175228IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    Send to blast
MGDEMVVANK SSEIVDSEFY KSYSIMVVDD DITCLSIVAA QLKKWKYQES CIVVPVMSAD  60
DRDSMVLEGL ERGAVFFLLK PISPDDLRDI WQYAALGKKN KGKGKSVVIE EIQENNSSSK  120
SSSGLLKSPH ENVKSSSSIN VEKGNKEGNK EESKKKSARK HKEAEKEESS TPPKKTKLVW  180
TDALHNKFLQ AIREIGLDRA YPRTILEVMD VPGLTRENVA SHLQKYRIFL RKVTEESFRV  240
QAADTNLANS ATQSTFGSKG LTTISQLPQE NSGSQQPFLK NNSLAETSNR SSSSLSNRRA  300
TPAVTLPGYG KAKLVLNEGD SSKITSSNAN QLSIAEATKN QTRSLIHEDI STQLLNAAIS  360
ANQLITRNLK SLHNSSAAGE RHESNQSLVQ RDSSLIGFER DKELAAMLTS YLNQGANRTQ  420
LTRLPNNVET REGSTGTRLD QGWSSYFNQG ANHMQLTRLP NNVETGEGSG TIPDQDYEGE  480
KQSAAMWSSY ISQGANRMQL TRLPNNVETG GGSGTILGQD CEGEKQSAAM WSSYFNQGAN  540
RVQLTRFPNN FEAGGGSGTK PGQDGEGEKQ SAAMWSSYPN QEANRVNQGA NRVNQGEKQS  600
EVVMRSSNLQ LTRFPNNVET GGGSGTKLGQ DFDVSMFDKN NATSYSSRIG DLTSTFYSQL  660
NVQPFHVENS NDQGETTFNF TDASNQDQEA YYPLPLDYTS GEAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-18171234164ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016490995.10.0PREDICTED: two-component response regulator ARR11-like
TrEMBLA0A1S4BQ410.0A0A1S4BQ41_TOBAC; two-component response regulator ARR11-like
STRINGXP_009781788.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32902038
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.13e-30response regulator 1