PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016489685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Dof | ||||||||
Protein Properties | Length: 293aa MW: 32923.4 Da PI: 7.7302 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.2 | 5e-40 | 38 | 97 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+a+kcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s XP_016489685.1 38 EQAQKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRIS 97 7899*****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-29 | 25 | 95 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.3E-33 | 39 | 95 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.283 | 41 | 95 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 43 | 79 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MDSSSAHHHH QEMSSQTLES MLVCTKQEQE KKPRPAAEQA QKCPRCDSTN TKFCYYNNYS 60 LTQPRYFCKS CRRYWTKGGT LRNVPVGGGC RKNKRISSKR SQDQSLTNSP NNAISIITPT 120 SYDSSSDLSQ AFARLQKQAN GNLGIEENDN MSMMYNNHGN NIAPSSFLDT LRGGFLETPN 180 GFQYQNLYYG NIGSNENNMG QVQNGGIGVI NNVNEEMGMN YDQEMSGGKI VKQEMCNIAR 240 EGENNRILWG FPWQINGEVN NMSDFEASNR QQNWINTGFG GSSWHGLLNS PLM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009598584.1 | 0.0 | PREDICTED: dof zinc finger protein DOF2.1-like | ||||
Refseq | XP_016489685.1 | 0.0 | PREDICTED: dof zinc finger protein DOF2.1-like | ||||
TrEMBL | A0A1S4BLF5 | 0.0 | A0A1S4BLF5_TOBAC; dof zinc finger protein DOF2.1-like | ||||
STRING | XP_009598584.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28510.1 | 1e-42 | Dof family protein |