PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016488656.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 306aa    MW: 35082.6 Da    PI: 8.9944
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016488656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1262e-081692151561
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                      +A rsR RK++ i+eLe+ v++L+ae ++L  ele l ++   l +
  XP_016488656.1 169 QSAHRSRVRKLQHIAELERTVQALQAEGSELSAELEFLDQQNIILSM 215
                     69**********************************99988765555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-6160219IPR004827Basic-leucine zipper domain
CDDcd147031.51E-13160211No hitNo description
Gene3DG3DSA:1.20.5.1707.5E-9169213No hitNo description
SuperFamilySSF579594.11E-7169213No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MESSNGSSLK NFSFSNKQLI MDSNSEGSGS SHHHRCNSES FLIEEQPSWL DDLLNEPAET  60
LVVHKGHRRS ASDTFAYIGA AAERLNTREN NNNVNVGGSS INYVSYKDHF TSVSFDTKPT  120
FAKAALELNE KHNREVTSTQ NKEGSSERSN NTQAKHSMSK ADAKRAKQQS AHRSRVRKLQ  180
HIAELERTVQ ALQAEGSELS AELEFLDQQN IILSMENRAL RQRLDSLSQE QLIKHLEQEM  240
LERELTRLQT LYQMQRQQVQ QQQHQQPQQQ NHSKHRRNKS RDLEAQFANL SIKNNEASSS  300
RVQMWK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754507e-75HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488656.10.0PREDICTED: uncharacterized protein At4g06598-like isoform X2
TrEMBLA0A1S4BIG50.0A0A1S4BIG5_TOBAC; uncharacterized protein At4g06598-like isoform X2
STRINGXP_009623359.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.22e-37bZIP family protein