PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016488655.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 310aa    MW: 35367.9 Da    PI: 9.0011
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016488655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.41.5e-081692091555
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      +A rsR RK++ i+eLe+ v++L+ae ++L  ele l ++
  XP_016488655.1 169 QSAHRSRVRKLQHIAELERTVQALQAEGSELSAELEFLDQQ 209
                     69*********************************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-6160219IPR004827Basic-leucine zipper domain
CDDcd147031.53E-13160211No hitNo description
Gene3DG3DSA:1.20.5.1707.7E-9169213No hitNo description
SuperFamilySSF579593.68E-7169213No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MESSNGSSLK NFSFSNKQLI MDSNSEGSGS SHHHRCNSES FLIEEQPSWL DDLLNEPAET  60
LVVHKGHRRS ASDTFAYIGA AAERLNTREN NNNVNVGGSS INYVSYKDHF TSVSFDTKPT  120
FAKAALELNE KHNREVTSTQ NKEGSSERSN NTQAKHSMSK ADAKRAKQQS AHRSRVRKLQ  180
HIAELERTVQ ALQAEGSELS AELEFLDQQN IILSMENRAL RQRLDSLSQE QLIKHLEQEM  240
LERELTRLQT LYQMQRQQVQ QQQHQQPQQQ NHSKHRRNKS RDLEAQFANL SIKNNEASSS  300
RVQVTGSVRM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754507e-84HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488655.10.0PREDICTED: uncharacterized protein At4g06598-like isoform X1
TrEMBLA0A1S4BIF20.0A0A1S4BIF2_TOBAC; uncharacterized protein At4g06598-like isoform X1
STRINGXP_009623359.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114452023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.28e-38bZIP family protein