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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016487626.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 465aa MW: 53124.7 Da PI: 6.6488 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016487626.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 295.1 | 1.8e-90 | 85 | 461 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l++ Ll A+av++++ a + L++l +++s gd++qR+aayf+ +L arl+ s y+ + +t+ +ee+ a++ f++vsP+++f+h
XP_016487626.1 85 LIHSLLISATAVDENSIDSAVENLQELYQNVSLLGDSVQRVAAYFADGLIARLLTRNSPFYDMIIKLPTQ----EEEFLAFTEFYKVSPFYQFAH 175
57999999***********************************************9*****998777775....68889999************* PP
GRAS 96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlv 182
+t NqaIlea+e+e +H+iDf is+G+QWp+L+q+L++ + ++ sl+iTg g+ +el+et+ rL +fA+ + +++fef+ +
XP_016487626.1 176 FTSNQAILEAFEKEentnnGFLHVIDFAISYGFQWPSLIQSLSENAttSNRISLKITGYGK----TIDELRETETRLVSFAKGFrNLSFEFQGI- 265
*************976666678*********************988656677*********....99***************9758*******8. PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
l+ +l++L +++E+laVn++++l +l s s+++ +Lk v sl P +v++veqe + ++Fl rf+e+l+y++a+fdsl+ lp
XP_016487626.1 266 ---LSGSKLSNLTKRKNETLAVNFIFHLNSLS--SY---SKISYTLKEVHSLCPSIVTIVEQEGCKSPQNFLPRFMESLHYFAAMFDSLDDCLPI 352
...888899*****************999997..33...33558*************************************************** PP
GRAS 278 eseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve...........eesgslv 359
+s er ++E+ lg+ei+nv+ e+++ r e++e+W+ r+e+ GF +pls+k+ +qaklll+ + s +++ e+ ++
XP_016487626.1 353 DSIERLSIEKNHLGKEIKNVLNYEKNNnFLSRYEQMETWKGRMESHGFLGLPLSSKNIMQAKLLLKIRShSSPIQLDggnggfrifetEDPRAIS 447
************************9993469**********************************876644333333444444443534455555 PP
GRAS 360 lgWkdrpLvsvSaW 373
l W+dr++v++SaW
XP_016487626.1 448 LAWQDRSIVTASAW 461
************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MGDIVDHEEE LLCLRLAIVT NSCCERKKIK KRKRRELAFI NNWDLNESNY CEGKIFRLLE 60 LREAMLKIDV KKKGSVVEDG KGLHLIHSLL ISATAVDENS IDSAVENLQE LYQNVSLLGD 120 SVQRVAAYFA DGLIARLLTR NSPFYDMIIK LPTQEEEFLA FTEFYKVSPF YQFAHFTSNQ 180 AILEAFEKEE NTNNGFLHVI DFAISYGFQW PSLIQSLSEN ATTSNRISLK ITGYGKTIDE 240 LRETETRLVS FAKGFRNLSF EFQGILSGSK LSNLTKRKNE TLAVNFIFHL NSLSSYSKIS 300 YTLKEVHSLC PSIVTIVEQE GCKSPQNFLP RFMESLHYFA AMFDSLDDCL PIDSIERLSI 360 EKNHLGKEIK NVLNYEKNNN FLSRYEQMET WKGRMESHGF LGLPLSSKNI MQAKLLLKIR 420 SHSSPIQLDG GNGGFRIFET EDPRAISLAW QDRSIVTASA WHCVL
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 26 | 34 | KKIKKRKRR |
2 | 29 | 34 | KKRKRR |