PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016487472.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 268aa    MW: 30857.5 Da    PI: 4.5733
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016487472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19110160255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_016487472.1 110 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAAMAYDKAALRIRG 160
                     7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-31109169IPR001471AP2/ERF domain
CDDcd000182.05E-30110168No hitNo description
SuperFamilySSF541711.05E-23110170IPR016177DNA-binding domain
PROSITE profilePS5103223.907110168IPR001471AP2/ERF domain
SMARTSM003802.2E-37110174IPR001471AP2/ERF domain
PfamPF008471.3E-14110160IPR001471AP2/ERF domain
PRINTSPR003674.3E-11111122IPR001471AP2/ERF domain
PRINTSPR003674.3E-11134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MTHVEKNQEQ EVACEEILEN VWANFISKNE ANEKAQRETN ELCPEKWEEL PSLERLPSLG  60
RWISMGADTW EELLNEILPP NDKMHSNDES TSKNEDVKVE KKKMVITTRH YRGVRRRPWG  120
KYAAEIRDSS RKGARVWLGT FNTAEEAAMA YDKAALRIRG PKAYLNFPLE TVAQAMGISF  180
PEQEWTFPSA VSQIGGAYLG WDDHSISNSR KRVSRDWSMF EDLDVINQLP LQKKIMRNGE  240
EDLDQSDLDI LEFEDLGSDY LDSLLSSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-28109169161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016487472.10.0PREDICTED: ethylene-responsive transcription factor ERF091-like
TrEMBLA0A1S4BF420.0A0A1S4BF42_TOBAC; ethylene-responsive transcription factor ERF091-like
STRINGXP_009776179.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.12e-26ERF family protein