PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016481169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 217aa MW: 23854.7 Da PI: 8.5045 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.4 | 2.1e-07 | 141 | 172 | 4 | 39 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKls 39 +h+ +Er RR++i +++ L++l+P + +kKl XP_016481169.1 141 SHSLAERARREKISERMKILQDLVPGC----NKKLH 172 8************************99....67765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 9.23E-6 | 135 | 171 | No hit | No description |
SuperFamily | SSF47459 | 3.79E-9 | 135 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.439 | 137 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-9 | 137 | 176 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.0E-5 | 141 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0048446 | Biological Process | petal morphogenesis | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MDPMMNEARA FQAAAPNPPF NLAEIWPFPI NAGAAMPYAN GDHHFPINDP MLLDHRTNHR 60 SGSARKRRED DESAKGVSTS GNGLSESDSK RLKATGSNEN HESGGDGEGN SGKSADQPAK 120 SAEPPKDYIH VRARRGQATD SHSLAERARR EKISERMKIL QDLVPGCNKK LHYSQIGSML 180 VSSVDVSITS RAPMQVQPWN LPFLFVITIS FQFVIFS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00207 | DAP | Transfer from AT1G59640 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016481169.1 | 1e-162 | PREDICTED: transcription factor bHLH79-like isoform X4 | ||||
Swissprot | Q0JXE7 | 4e-38 | BPE_ARATH; Transcription factor BPE | ||||
TrEMBL | A0A1S4AWV4 | 1e-161 | A0A1S4AWV4_TOBAC; transcription factor bHLH79-like isoform X4 | ||||
STRING | XP_009776012.1 | 1e-122 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.2 | 2e-34 | BIG PETAL P |
Publications ? help Back to Top | |||
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