PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016476398.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 278aa    MW: 31560 Da    PI: 5.5882
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016476398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.8e-11162218561
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                     ++ +r+++NRe+ArrsR RK++ +e+L++ +   +aeN++L +++   + +++ ++ 
  XP_016476398.1 162 RKRKRMISNRESARRSRIRKEKHLENLRNQANRHKAENRDLTNRVHLVTSHCQLVQR 218
                     5789***********************************************995554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502179.588160206IPR004827Basic-leucine zipper domain
SMARTSM003383.5E-6161222IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.7E-8162214No hitNo description
PfamPF001703.8E-8162216IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.43E-10162213No hitNo description
CDDcd147021.65E-19163214No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MLSTFPAIIL SSDGTFPSQF SSFYDGFFPL NCLESTFIFS EQMVELTFQT PTLESVIFHS  60
GSGSDNSKPD SPNSSFGSDE SNMNNHSPWE CLESAFTLPE QGVDSVFTPK QSPTPEPVIS  120
NCGSGPDKYI TDSPNSSSGS DELNMNNDSP NSGSDILFIN ERKRKRMISN RESARRSRIR  180
KEKHLENLRN QANRHKAENR DLTNRVHLVT SHCQLVQRNN EMLRTELVLL QQRLESIREI  240
LLAQQLQQQL YNSSAWPCNN YVEQTPQIIT NQPIIYHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174181RRSRIRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009621054.10.0PREDICTED: G-box-binding factor 1-like
RefseqXP_016476398.10.0PREDICTED: G-box-binding factor 1-like
TrEMBLA0A1S4AIZ70.0A0A1S4AIZ7_TOBAC; G-box-binding factor 1-like
STRINGXP_009621054.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.24e-21basic leucine-zipper 6