PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016476259.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 221aa MW: 25511.4 Da PI: 9.1627 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.5 | 1.1e-11 | 116 | 169 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 k+ rr+ +NRe+ArrsR RK++ +e+L++ + L+ N++L ++ ++ +++ XP_016476259.1 116 EKKRRRMVSNRESARRSRMRKQKHLENLRNQANRLKVGNRELTNRFRLMTHQCQ 169 5899***************************************99999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-10 | 113 | 177 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.025 | 115 | 167 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.18E-10 | 117 | 168 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-9 | 117 | 170 | No hit | No description |
Pfam | PF00170 | 2.0E-8 | 117 | 169 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.10E-16 | 118 | 169 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 120 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MLSTFPATTL PADGLFPHLF PAFDGGFTPW ECIETAFLFP QQVEEEPVIS PKESPPPEPV 60 ISNSGSGSDD SKPNSVHSSS GSDEPSRNNN NNNNNLNCCP DERKRQRTTS NRDIDEKKRR 120 RMVSNRESAR RSRMRKQKHL ENLRNQANRL KVGNRELTNR FRLMTHQCQF VQCDNERLRT 180 ESAVLRQRLE GIRQILLARQ LEQQFNAYSA WACNNMEQRP Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 120 | RKRQRTTSNRDIDEKKRRR |
2 | 129 | 136 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009589486.1 | 1e-163 | PREDICTED: basic leucine zipper 43-like | ||||
Refseq | XP_016476259.1 | 1e-163 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | A0A1S4AI19 | 1e-162 | A0A1S4AI19_TOBAC; basic leucine zipper 43-like | ||||
STRING | XP_009589486.1 | 1e-162 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 2e-36 | basic leucine-zipper 6 |