PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016474865.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 231aa    MW: 26415.8 Da    PI: 8.2961
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016474865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.22e-131761855
             AP2  8 wdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  XP_016474865.1 17 RHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 61
                    68889******99966...3.6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.58769IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-151770IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-151771IPR016177DNA-binding domain
PfamPF008474.2E-91761IPR001471AP2/ERF domain
SMARTSM003807.3E-221775IPR001471AP2/ERF domain
CDDcd000182.20E-231771No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MLIIISNKRF CIDTTCRHHH NGRWEARIGR VFGNKYLYLG TYSTQEEAAR AYDIAAIEYR  60
GINAVTNFDL STYIRWLKPG ANSQMSFQDI RSENQAIQMN TNDMINPIND PKFPFSSNYF  120
TTTRETLPPI PQSQEPIERK MPLSPCNKSS SPTALSLLLR SSMYRELVEK NSTTTASEKE  180
GPNMKNKIQT NTEDEFVFYT SDKLPPLESL EKGTSSRLCD RAGQSFWNAM P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016474865.11e-174PREDICTED: ethylene-responsive transcription factor CRF4-like
TrEMBLA0A1S4ADV21e-173A0A1S4ADV2_TOBAC; ethylene-responsive transcription factor CRF4-like
STRINGSolyc06g066390.1.11e-137(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34402145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.23e-27ERF family protein