PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016473616.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 437aa MW: 47636.5 Da PI: 10.204 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.4e-12 | 288 | 346 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +l+s + XP_016473616.1 288 KRAKRILANRQSAARSKERKLCYISELEHKVQTLQTETTTLSTQVTILQKDFTELTSLN 346 9*************************************************999999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-17 | 284 | 348 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.944 | 286 | 349 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.0E-12 | 288 | 344 | No hit | No description |
Pfam | PF00170 | 5.5E-11 | 288 | 346 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.03E-12 | 288 | 344 | No hit | No description |
CDD | cd14703 | 1.92E-13 | 289 | 340 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence Send to blast |
MAQPNSKPHI SHNFGVGASH TRSLSQPSIF SNNGLPPLSP FPHSESSLAS ANSSLKDTSM 60 EEVDVSSRAP PFVSSFTREN TFRCSDSRPP KKGHRRSNSD VPLGLSAMIK SSPQLVAISG 120 LGVLDGATLL GDPLRRKSGG EVVDKLSSYM NLENMEALNS SITEDKVKDS ISSLTKLTGG 180 NNSNKKAESV SKGTSIKRSA DADITRSTRH FRSLSMDSAV GSFHYGDESP KLPTSLVNCP 240 GKLSSSSSGN DNSDKINFDL GNGEFSEAEM RKIMADERLA EIVVSDPKRA KRILANRQSA 300 ARSKERKLCY ISELEHKVQT LQTETTTLST QVTILQKDFT ELTSLNNELR FRLQAMEQQA 360 QLRDALHKAL TAEVHRLKFA MGELKKEGRL PNSSRAQQMP VKPNIFQMQR QQSSEIQQFS 420 VAKPNTATKA SATPASA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016473615.1 | 0.0 | PREDICTED: transcription factor RF2a-like | ||||
Refseq | XP_016473616.1 | 0.0 | PREDICTED: transcription factor RF2a-like | ||||
Refseq | XP_016473617.1 | 0.0 | PREDICTED: transcription factor RF2a-like | ||||
TrEMBL | A0A1S4AAE6 | 0.0 | A0A1S4AAE6_TOBAC; transcription factor RF2a-like | ||||
STRING | XP_009598094.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 5e-78 | bZIP family protein |