PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016473615.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 437aa MW: 47636.5 Da PI: 10.204

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016473615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37	7.4e-12	288	346	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +l+s + XP_016473615.1 288 KRAKRILANRQSAARSKERKLCYISELEHKVQTLQTETTTLSTQVTILQKDFTELTSLN 346 9*************************************************999999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.8E-17	284	348	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.944	286	349	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.0E-12	288	344	No hit	No description
Pfam	PF00170	5.5E-11	288	346	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.03E-12	288	344	No hit	No description
CDD	cd14703	1.92E-13	289	340	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence Send to blast
MAQPNSKPHI SHNFGVGASH TRSLSQPSIF SNNGLPPLSP FPHSESSLAS ANSSLKDTSM 60 EEVDVSSRAP PFVSSFTREN TFRCSDSRPP KKGHRRSNSD VPLGLSAMIK SSPQLVAISG 120 LGVLDGATLL GDPLRRKSGG EVVDKLSSYM NLENMEALNS SITEDKVKDS ISSLTKLTGG 180 NNSNKKAESV SKGTSIKRSA DADITRSTRH FRSLSMDSAV GSFHYGDESP KLPTSLVNCP 240 GKLSSSSSGN DNSDKINFDL GNGEFSEAEM RKIMADERLA EIVVSDPKRA KRILANRQSA 300 ARSKERKLCY ISELEHKVQT LQTETTTLST QVTILQKDFT ELTSLNNELR FRLQAMEQQA 360 QLRDALHKAL TAEVHRLKFA MGELKKEGRL PNSSRAQQMP VKPNIFQMQR QQSSEIQQFS 420 VAKPNTATKA SATPASA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence Send to blast

MAQPNSKPHI SHNFGVGASH TRSLSQPSIF SNNGLPPLSP FPHSESSLAS ANSSLKDTSM  60
EEVDVSSRAP PFVSSFTREN TFRCSDSRPP KKGHRRSNSD VPLGLSAMIK SSPQLVAISG  120
LGVLDGATLL GDPLRRKSGG EVVDKLSSYM NLENMEALNS SITEDKVKDS ISSLTKLTGG  180
NNSNKKAESV SKGTSIKRSA DADITRSTRH FRSLSMDSAV GSFHYGDESP KLPTSLVNCP  240
GKLSSSSSGN DNSDKINFDL GNGEFSEAEM RKIMADERLA EIVVSDPKRA KRILANRQSA  300
ARSKERKLCY ISELEHKVQT LQTETTTLST QVTILQKDFT ELTSLNNELR FRLQAMEQQA  360
QLRDALHKAL TAEVHRLKFA MGELKKEGRL PNSSRAQQMP VKPNIFQMQR QQSSEIQQFS  420
VAKPNTATKA SATPASA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016473615.1	0.0	PREDICTED: transcription factor RF2a-like
Refseq	XP_016473616.1	0.0	PREDICTED: transcription factor RF2a-like
Refseq	XP_016473617.1	0.0	PREDICTED: transcription factor RF2a-like
TrEMBL	A0A1S4AAE6	0.0	A0A1S4AAE6_TOBAC; transcription factor RF2a-like
STRING	XP_009598094.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1265	24	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	5e-78	bZIP family protein