PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016473150.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 331aa    MW: 36441.2 Da    PI: 6.6735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016473150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.8e-13123170455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk L+
  XP_016473150.1 123 MHIWTERERRKKMRNMFSNLHALLPQL----PPKADKSTIVDEAVNYIKTLE 170
                     56678*********************6....39****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.157119169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-15119188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.25E-13122174No hitNo description
Gene3DG3DSA:4.10.280.101.0E-14122181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-10124170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-8127175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.6E-5251305No hitNo description
SuperFamilySSF550212.37E-6253303No hitNo description
PROSITE profilePS5167110.119254331IPR002912ACT domain
CDDcd048732.98E-6255293No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MRLDFTFYSL SFSGPIFVLP NCKLNLFLNM DEGGEDCFIW ENQGWAFLNS DNSGGNGAKS  60
SGTKLPDTSH GKQLAISDAV AREIEMPGPS AGRKRTAPGK NGVKGNGEVN EGKVNGGESD  120
HEMHIWTERE RRKKMRNMFS NLHALLPQLP PKADKSTIVD EAVNYIKTLE HTLEKLQRQK  180
LERLHGMATS IITSQKLSAD SIISREEFLA DQGSTNNAAI RPTNNAANPI SMPAAFQTWT  240
SPNVILNVFG EEAHISVCCP RKPGLLSSIC YVLEKHKIEV VSAQISSNDH RSMYMIQAHA  300
SGASDQFSET FLVEEIYKQA AGEIILCVTS Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016473150.10.0PREDICTED: transcription factor bHLH95-like isoform X2
TrEMBLA0A1S4A9330.0A0A1S4A933_TOBAC; transcription factor bHLH95-like isoform X2
STRINGXP_009607578.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-58bHLH family protein