PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016473047.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 262aa    MW: 29977.1 Da    PI: 6.8185
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016473047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.95e-13111157454
             AP2   4 kGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +GVr +k +g++ AeIr  +     + kr++lg+f taeeA + +   ++++e
  XP_016473047.1 111 SGVRKRK-SGKYCAEIRNpF-----NkKRIWLGTFITAEEAIQVYQSKKLEFE 157
                     8***999.7*********55.....34**************999977777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.368109167IPR001471AP2/ERF domain
PfamPF008474.3E-5110147IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-11111156IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.1E-15112158IPR001471AP2/ERF domain
CDDcd000182.68E-15112149No hitNo description
SMARTSM003802.0E-6112163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MIIPSILLYL NTYVVFSSLF LPNSFLSFHL LIMKSQTKFA EVKNEKQQQE QSIKIQRKIK  60
IKISDPDATE SSSSEEKEHE KRPSKKKPKL TVHEIIQGKV KTTTFSSKLP SGVRKRKSGK  120
YCAEIRNPFN KKRIWLGTFI TAEEAIQVYQ SKKLEFEEKM KEAKNAKMDT FEKSEIETQT  180
SDSSNGIEGK GNNSSVGEEQ EIGQENDEEM LMGQWIQISD NKEVYISVKL GVPVVDNYGF  240
LLGEFSELDD LSISVFDREN NI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016473047.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1S4A8S40.0A0A1S4A8S4_TOBAC; ethylene-responsive transcription factor ERF118-like
STRINGXP_009599132.11e-101(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-13ERF family protein