PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016472543.1
Common NameNtERF#074
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 173aa    MW: 19130.6 Da    PI: 9.9649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016472543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-203080155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+++GVr ++ +gr++AeIrd ++    + r +lg+f+taeeAa a+++a+++l+g
  XP_016472543.1 30 SHFRGVRKRP-WGRYAAEIRDpWK----KSRRWLGTFDTAEEAALAYDEAARSLRG 80
                    78********.**********883....5999**********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.54E-223088IPR016177DNA-binding domain
CDDcd000181.78E-293087No hitNo description
PfamPF008477.5E-133080IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-303187IPR001471AP2/ERF domain
PROSITE profilePS5103221.7733188IPR001471AP2/ERF domain
SMARTSM003803.5E-333194IPR001471AP2/ERF domain
PRINTSPR003677.3E-103243IPR001471AP2/ERF domain
PRINTSPR003677.3E-105470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MVAQSSTMCG GDGGGSQGNT RQPVRTTKES HFRGVRKRPW GRYAAEIRDP WKKSRRWLGT  60
FDTAEEAALA YDEAARSLRG PRAKTNFGLD GLAAIGPPPA LPKLPNWCFN ALYGSYLEDR  120
SRFGTGETTV ASSEYSGYNL EGVGVVMNEH EKKTKIEKKK PFLFDLNLPA PLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-202789164ATERF1
3gcc_A2e-202789164ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690780.0AB669078.1 Nicotiana tabacum NtERF#074 gene for ethylene response factor #74, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009788813.11e-126PREDICTED: ethylene-responsive transcription factor 9-like
RefseqXP_016472543.11e-126PREDICTED: ethylene-responsive transcription factor 9-like
SwissprotQ9FE676e-30ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLA0A1U7XD611e-125A0A1U7XD61_NICSY; ethylene-responsive transcription factor 9-like
TrEMBLR4WAR61e-125R4WAR6_TOBAC; Ethylene response factor #74
STRINGXP_009788813.11e-126(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-23erf domain protein 9
Publications ? help Back to Top
  1. Ogata T,Kida Y,Tochigi M,Matsushita Y
    Analysis of the cell death-inducing ability of the ethylene response factors in group VIII of the AP2/ERF family.
    Plant Sci., 2013. 209: p. 12-23
    [PMID:23759099]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]
  4. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]