PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016472541.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 316aa    MW: 33904 Da    PI: 8.8539
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016472541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.92.7e-6421441149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+ + +g s+s+sp+ss+q
  XP_016472541.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYQLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPMERLDFIGGSTSISPCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                             +sp +s ++sp+sss  sp+s++ +++ +   +sl+p+l++ls+ sss
  XP_016472541.1  97 --------PSPFTSNNPSPASSSLHSPASSSYATNLNMdgKSLIPWLKNLSSGSSS 144
                     ........8889999999888887777665554443333499********996665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.1E-643139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY QLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPMERL DFIGGSTSIS PCSSYQPSPF TSNNPSPASS SLHSPASSSY  120
ATNLNMDGKS LIPWLKNLSS GSSSASSSKL PHFHIHTGSI SAPVTPPFSS PTARTPRLKT  180
DAGWAGFRYP FLPSSTPASP VRQTFTGSEW LTGISGPPSP TYSLVSSNPF GFKMDGLALS  240
HGGSRMCTPG QSGTCSPAIT AGLDNTADIP MAEVISDEFA FGSNAGGMVK PWEGERIHED  300
CGPDDLELTL GSSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768995.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
RefseqXP_016472541.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-124BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S4A7I30.0A0A1S4A7I3_TOBAC; BES1/BZR1 homolog protein 4-like
TrEMBLA0A1U7W4060.0A0A1U7W406_NICSY; BES1/BZR1 homolog protein 4-like
STRINGXP_009768995.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-111BES1/BZR1 homolog 4