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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016470911.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 435aa MW: 49147 Da PI: 5.1829 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016470911.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 311.7 | 1.6e-95 | 43 | 423 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkf 93
l++lLl+cA+a++++d +laq++++ l++las++gdp+qRl++ f++AL +r +r +++ + +++ ++ + +++++l ++++ P+++f
XP_016470911.1 43 LEKLLLHCANALENNDVTLAQQVMWVLNNLASSNGDPNQRLTSWFLRALISRASRVCPTATNNYLYGSSN-LDQRRLMSVTELagYVDLIPWHRF 136
5799***************************************************888887766554444.33455555555577********** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.... 181
++ + N aI++a+eg+++vHi+Df+i++++QWp+L++a+a+RpegppslRi + + s+ + + ee+g rLa+fA+ +vpfef+v+
XP_016470911.1 137 GFCASNGAIYKAIEGHTKVHILDFSITHCMQWPTLIDAIAKRPEGPPSLRISVPSWRPSVppfINVSSEEVGLRLANFAKFRDVPFEFQVIedln 231
****************************************************9888666688999*************************96653 PP
GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
+ l++l++++L+++ +Eal+Vn++ l +++de+ + +s rd +L+ vk+l+P +++vv++++d++++s+ r++ +++y + fd+le+
XP_016470911.1 232 YDMLLSQLSPSTLQLRDDEALVVNCQNWLRYMPDEQIKGSSisSRDIFLDRVKELNPCILTVVDEDSDLGNSSLTSRLATCFNYLWIPFDALETF 326
33367788***************************987666669*************************************************** PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
lp++s++r +E+ +g +i+n++ eg +r+er e+ +k ++r+e++GF +v++ e++ k++k+ll +++ g+ +++e++ lvl+Wk+++ v
XP_016470911.1 327 LPKDSRQRLDYEAD-IGHRIENIIGFEGVQRIERLERCNKFSQRMENSGFMSVSFCEETIKEVKSLLDEHA-SGWGMKKEDDMLVLTWKGHNSVY 419
**************.********************************************************.8999******************* PP
GRAS 370 vSaW 373
++aW
XP_016470911.1 420 ATAW 423
**** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 435 aa
Download sequence Send
to blast |
MKAELRGTST TIPLQNSSLF NNPQNSLAGA LKGCIGNLDG ACLEKLLLHC ANALENNDVT 60 LAQQVMWVLN NLASSNGDPN QRLTSWFLRA LISRASRVCP TATNNYLYGS SNLDQRRLMS 120 VTELAGYVDL IPWHRFGFCA SNGAIYKAIE GHTKVHILDF SITHCMQWPT LIDAIAKRPE 180 GPPSLRISVP SWRPSVPPFI NVSSEEVGLR LANFAKFRDV PFEFQVIEDL NYDMLLSQLS 240 PSTLQLRDDE ALVVNCQNWL RYMPDEQIKG SSISSRDIFL DRVKELNPCI LTVVDEDSDL 300 GNSSLTSRLA TCFNYLWIPF DALETFLPKD SRQRLDYEAD IGHRIENIIG FEGVQRIERL 360 ERCNKFSQRM ENSGFMSVSF CEETIKEVKS LLDEHASGWG MKKEDDMLVL TWKGHNSVYA 420 TAWVLVPPQM DTRIE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975519 | 0.0 | HG975519.1 Solanum lycopersicum chromosome ch07, complete genome. |