PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016469418.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 249aa    MW: 28194.7 Da    PI: 5.0806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016469418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.5e-1959109256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr++  +++Wv+e+r+ps+   +kr++lg++ t+e+Aa+a++ a+++l+g+
  XP_016469418.1  59 IYRGVRRRN-NNKWVCELREPSK---QKRIWLGTYPTPEMAARAHDVAALALRGN 109
                     69****887.8*********964...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.94E-3058118No hitNo description
PfamPF008476.4E-1458108IPR001471AP2/ERF domain
PROSITE profilePS5103221.98359116IPR001471AP2/ERF domain
SMARTSM003804.0E-2959122IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-2959118IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-2159118IPR016177DNA-binding domain
PRINTSPR003673.1E-76071IPR001471AP2/ERF domain
PRINTSPR003673.1E-78298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MTNNNSISCS LDSNPANLER DYSQETSSSS LDEGIILLAS SRPKKRAGRK KFKETRHPIY  60
RGVRRRNNNK WVCELREPSK QKRIWLGTYP TPEMAARAHD VAALALRGNS ATLNFADSLW  120
RLPVIVSKDP KDLRQAAVKA AEAFRPDPEL VGVDYMNEEV NSNEEVKCQE NVVNGGGYDM  180
GVKELKMQNK EMENVLCCNW GENSDMLEIE GSWQEMIGLL FSPTPRLGNC FSWDDVESDV  240
EVSLWNYSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016469418.10.0PREDICTED: dehydration-responsive element-binding protein 1D-like
TrEMBLA0A1S3ZYI80.0A0A1S3ZYI8_TOBAC; dehydration-responsive element-binding protein 1D-like
STRINGXP_009619193.11e-167(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.19e-47ERF family protein