PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016461285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 273aa MW: 31434.4 Da PI: 4.9323 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1e-19 | 115 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd k +r++lg+f taeeAa a+++a+++++g XP_016461285.1 115 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAAMAYDKAALRIRG 165 7********.**********3...2234*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.0E-31 | 114 | 174 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.80E-30 | 115 | 173 | No hit | No description |
PROSITE profile | PS51032 | 23.907 | 115 | 173 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-37 | 115 | 179 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.3E-14 | 115 | 165 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-23 | 115 | 175 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.4E-11 | 116 | 127 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-11 | 139 | 155 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence Send to blast |
MKYSLKMTHV EKNQQQEVAC EEILENVWAN FISKNEANEK AQSETNELFP EKWEELPSLE 60 RLPSLGRWIS MGAETWEELL NGILPPNDKI HSNDTSTSKN EDVKKEKKKM VVTRHYRGVR 120 RRPWGKYAAE IRDSSRKGAR VWLGTFNTAE EAAMAYDKAA LRIRGPKAYL NFPLETVAQA 180 MGISVPEQKW TFPPSASQIG GAYLGWDDQS ISNSRKRVSR DWSMFEDLDV INQLPLQKKI 240 MRSWEEDLDQ SDLDILEFED LGSDYLDSLL SSL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-27 | 114 | 174 | 1 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016461285.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF091-like | ||||
TrEMBL | A0A1S3ZA03 | 0.0 | A0A1S3ZA03_TOBAC; ethylene-responsive transcription factor ERF091-like | ||||
STRING | XP_009625586.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11237 | 18 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 1e-25 | ERF family protein |