PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016460323.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Dof | ||||||||
Protein Properties | Length: 196aa MW: 22091.7 Da PI: 9.9151 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 99 | 3.1e-31 | 16 | 71 | 5 | 60 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 alkcprC+stntkfCy+nnyslsqPryfCk+C+r+Wtk G lr vP Gg r +++k XP_016460323.1 16 ALKCPRCESTNTKFCYFNNYSLSQPRYFCKTCKRHWTKDGVLRSVPEGGRRHRRNK 71 579*******************************************9997644433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-24 | 1 | 69 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 25.266 | 17 | 71 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.1E-29 | 17 | 70 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MPEQARLANI RMPLVALKCP RCESTNTKFC YFNNYSLSQP RYFCKTCKRH WTKDGVLRSV 60 PEGGRRHRRN KLSNSNNNNN NNNNTSKSPA SSAKNDGLKA TTNNSGSFNS NRFYGLVNPQ 120 IPPLRFMSPL GQLTDHFHYH YTPSDNNSTL NYSAISSSAP VVETSIDSIQ LEMEAQQFPN 180 LMGRLDPSMS SGIYPF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016460323.1 | 1e-145 | PREDICTED: dof zinc finger protein DOF2.4-like | ||||
TrEMBL | A0A1S3Z7D8 | 1e-143 | A0A1S3Z7D8_TOBAC; dof zinc finger protein DOF2.4-like | ||||
STRING | XP_009621202.1 | 1e-142 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18241 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37590.1 | 2e-32 | DNA binding with one finger 2.4 |