PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016457239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 750aa MW: 82291.6 Da PI: 6.4594 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.8 | 2.4e-20 | 56 | 111 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++k +++t++q++eLe++F++n++p++++r eL k+l L+ rqVk+WFqNrR+++k XP_016457239.1 56 KKKYHRHTPYQIQELEAAFKENPHPDEKARLELGKRLTLESRQVKFWFQNRRTQMK 111 79999************************************************999 PP | |||||||
2 | START | 163.3 | 1.8e-51 | 264 | 488 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela +a++el+k+a+ ++p+W++ e +n +e+ ++f++ + +++ea +a+g v ++ lve+l+d++ +W e++ + +t+ XP_016457239.1 264 ELAFAAMNELLKLAEIGDPLWFRNFdgsgEALNLEEYARSFPPCIGmkpsnFTTEATKATGTVMINSLVLVETLMDTS-RWVEMFScivgRTSTI 357 57899******************9999999*************99999**9***************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 +viss g lql++ae+q+ls lv R + f+R+++q+ +g+w++vdvS+d q+ ++ + +++lpSg+++++++ng+skv+w+eh+ XP_016457239.1 358 DVISSSasgsrnGNLQLIQAEFQVLSALVFvRQVKFLRFCKQHAEGVWAVVDVSIDTIQEGSQPREAGNCRRLPSGCIVQDLPNGYSKVIWIEHM 452 *****999*****************************************************998899999************************* PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 +++++++h+l+r++++sg+ +ga++w atlqrqce+ XP_016457239.1 453 EYDENTIHNLYRPFIRSGRGFGAQRWIATLQRQCEC 488 **********************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.9E-22 | 30 | 115 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.56E-20 | 39 | 113 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.734 | 53 | 113 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.5E-16 | 55 | 117 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.28E-17 | 56 | 113 | No hit | No description |
Pfam | PF00046 | 5.9E-18 | 56 | 111 | IPR001356 | Homeobox domain |
PROSITE profile | PS50848 | 38.472 | 255 | 491 | IPR002913 | START domain |
SuperFamily | SSF55961 | 3.16E-28 | 256 | 488 | No hit | No description |
CDD | cd08875 | 3.72E-110 | 259 | 487 | No hit | No description |
SMART | SM00234 | 2.5E-35 | 264 | 488 | IPR002913 | START domain |
Pfam | PF01852 | 1.3E-44 | 264 | 488 | IPR002913 | START domain |
SuperFamily | SSF55961 | 3.98E-13 | 533 | 743 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008289 | Molecular Function | lipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 750 aa Download sequence Send to blast |
MEGIGDMGMI GENFDAVAMG RSSREDEYES RSGSDNLDGG ASGDDLDAPL GKSSRKKKYH 60 RHTPYQIQEL EAAFKENPHP DEKARLELGK RLTLESRQVK FWFQNRRTQM KTQLERHENA 120 LLKQENDKLR IENIAMKEAM RSPMCGHCGG QAILGEIHIE EHHLRIENAR LRDELNRICV 180 LANKFLGRPL GSFPGAMPPG MANSGLELAV GRNGFGAMNS ADTALPMGLD FGNGLSSPLT 240 MMSPRPTPSM SSTDVSFDKS MLMELAFAAM NELLKLAEIG DPLWFRNFDG SGEALNLEEY 300 ARSFPPCIGM KPSNFTTEAT KATGTVMINS LVLVETLMDT SRWVEMFSCI VGRTSTIDVI 360 SSSASGSRNG NLQLIQAEFQ VLSALVFVRQ VKFLRFCKQH AEGVWAVVDV SIDTIQEGSQ 420 PREAGNCRRL PSGCIVQDLP NGYSKVIWIE HMEYDENTIH NLYRPFIRSG RGFGAQRWIA 480 TLQRQCECLA VITSSAVPSG DSAVISPSGR RSIAMLARRI TRNFCGGVCA TFYKWEPIQT 540 GTAEDTKLMM RKSIGDPGEP PGIVLSATRT IWLPVTHQRL FDFLRNEQTR SQWDVLSHGG 600 PMHQIVHIAK GQDLGNSISL FRANAASRDA NQNSMLILQD SCTDVSGSIV AYAAVDTAEM 660 NVVMSGGDSS CVAFLPSGFA IVPDCFQNSN NGMLEKEDNG GSSNGSLLTL GFQILVNSLP 720 AAKLTMESVN TVNALISRTL QGIKTAFQCN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016457238.1 | 0.0 | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X1 | ||||
Swissprot | Q0WV12 | 0.0 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | A0A1S3YYP1 | 0.0 | A0A1S3YYP1_TOBAC; homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X1 | ||||
STRING | XP_009606532.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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