PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_016455831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 189aa MW: 20310.6 Da PI: 4.6793 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.1e-18 | 17 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + ykG+r++k++g+Wv+eIr+p r r++lg+f t+e+Aa a++ a+++l+g XP_016455831.1 17 PVYKGIRRRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 68 68*******************9.....4489***********************998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 6.1E-12 | 17 | 68 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.669 | 18 | 76 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-31 | 18 | 82 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-20 | 18 | 78 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.7E-28 | 18 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.7E-7 | 19 | 30 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.50E-28 | 19 | 78 | No hit | No description |
PRINTS | PR00367 | 2.7E-7 | 58 | 78 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 189 aa Download sequence Send to blast |
MSSPGASSSG GSSGRHPVYK GIRRRKSSGK WVSEIREPRS PNRIWLGTFP TPEMAAVAYD 60 VAALALKGRD AELNFPNSAS SLPVPTTNSP RDIQAAAACA AAALGAAGDA LGARRGVDNS 120 NNRPVSREVE NSTPWNNNEF MDEDLIFDMP NVIMNMAEGM LLSPPRFNVP DDDTSAAEYI 180 ADQDLWNYP |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_009793989.1 | 1e-135 | PREDICTED: ethylene-responsive transcription factor ERF024 | ||||
Refseq | XP_016455831.1 | 1e-135 | PREDICTED: ethylene-responsive transcription factor ERF024-like | ||||
Swissprot | Q9SJR0 | 1e-58 | ERF24_ARATH; Ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | A0A1S3YU88 | 1e-134 | A0A1S3YU88_TOBAC; ethylene-responsive transcription factor ERF024-like | ||||
TrEMBL | A0A1U7Y419 | 1e-134 | A0A1U7Y419_NICSY; ethylene-responsive transcription factor ERF024 | ||||
STRING | XP_009793989.1 | 1e-135 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA553 | 22 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36450.1 | 4e-49 | ERF family protein |