PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016453607.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 289aa    MW: 32906.5 Da    PI: 8.8267
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016453607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.21.8e-13261289129
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtP 29 
                     k+r++W+peLH+rF++a++qLGGs+ AtP
  XP_016453607.1 261 KQRRCWSPELHRRFIDALKQLGGSQAATP 289
                     79**************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-9259289IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-8261289IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MGLIPPELSL DCRPKTYIPH TIIEFLQEVS TMDNSVYEKT LKIEDYVKRL EDEMKKIDSF  60
KRELPLCLLL VNDAIMALRE ESTQYKKPIV KPVFEESIPL KKISLKDDKV EMNKDNDSRE  120
KMSWMSSVQL WDSDPQNPNT DIHNSKKSSK SEPKKIPPQG GDNSGSYDPF QSCKSRNMGK  180
AFSPFNGYSG FPVKVDRKED KDDLPGLTLP TPGIKNLEDS MINGLSSKPR DNSVTSSIIV  240
SYRSNIHITS QLQQQQQTAR KQRRCWSPEL HRRFIDALKQ LGGSQAATP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009782556.10.0PREDICTED: uncharacterized protein LOC104231288
RefseqXP_016453607.10.0PREDICTED: uncharacterized protein LOC107777947
TrEMBLA0A1S3YNL50.0A0A1S3YNL5_TOBAC; uncharacterized protein LOC107777947
TrEMBLA0A1U7WZ170.0A0A1U7WZ17_NICSY; uncharacterized protein LOC104231288
STRINGXP_009782556.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.16e-30G2-like family protein