PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016451524.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 443aa MW: 48251.9 Da PI: 8.4496

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016451524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.1e-10	295	353	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +l s + XP_016451524.1 295 KRAKRILANRQSAARSKERKLRYISELEYKVQKLQTEATTLSTQVTILQKDFTELSSLN 353 9***********************************************99999998866 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-15	291	355	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.036	293	356	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.87E-11	295	348	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.0E-11	295	352	No hit	No description
Pfam	PF00170	4.4E-10	295	353	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.80E-20	296	347	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence Send to blast
MAQSNSKPPM SHNFGVGASH VSLKDTSMEE VDVNCQVPKA VSNFVRENAL RGSDGLPPRK 60 GHRRSNSDVS LGFSDMIQSS PQLIPISVQR ISGRAVNLGD SSGREKTIDL QKQPMGLSSN 120 GRIDVEGIGE RKSRGEVTDE LLFSYMNLEN IEALNSSGTE DRDKGSMVSG AKVSGNESSN 180 NEAESLLKGN GVSSQLTSLR EGVKRSADAD IAPTTRHFRS LSMDSAIGGF HYGDESPKLP 240 ASLVNHSGQL SPSNSGNESS SQRNFDFGNA EFSEAEMKKI MADEKLAEIA VSDPKRAKRI 300 LANRQSAARS KERKLRYISE LEYKVQKLQT EATTLSTQVT ILQKDFTELS SLNSELKFRV 360 QAMEQQAQLR DALHEALTSE VQRLKLAAGE LRDEGRLPNS MIQQMPVKHN MFPMQRQQPS 420 QIQQLSVGKP TTASSASATP ASA

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence Send to blast

MAQSNSKPPM SHNFGVGASH VSLKDTSMEE VDVNCQVPKA VSNFVRENAL RGSDGLPPRK  60
GHRRSNSDVS LGFSDMIQSS PQLIPISVQR ISGRAVNLGD SSGREKTIDL QKQPMGLSSN  120
GRIDVEGIGE RKSRGEVTDE LLFSYMNLEN IEALNSSGTE DRDKGSMVSG AKVSGNESSN  180
NEAESLLKGN GVSSQLTSLR EGVKRSADAD IAPTTRHFRS LSMDSAIGGF HYGDESPKLP  240
ASLVNHSGQL SPSNSGNESS SQRNFDFGNA EFSEAEMKKI MADEKLAEIA VSDPKRAKRI  300
LANRQSAARS KERKLRYISE LEYKVQKLQT EATTLSTQVT ILQKDFTELS SLNSELKFRV  360
QAMEQQAQLR DALHEALTSE VQRLKLAAGE LRDEGRLPNS MIQQMPVKHN MFPMQRQQPS  420
QIQQLSVGKP TTASSASATP ASA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016451524.1	0.0	PREDICTED: basic leucine zipper 19-like isoform X2
TrEMBL	A0A1S3YH27	0.0	A0A1S3YH27_TOBAC; basic leucine zipper 19-like isoform X2
STRING	XP_009798752.1	0.0	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	4e-92	bZIP family protein