PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016451267.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 289aa    MW: 32501.5 Da    PI: 6.5438
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016451267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18109158154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s+ykGVr++k +g+W+AeIrd +     + +r++lg++ ta+eA +a++  r+++e
  XP_016451267.1 109 SKYKGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYSTAKEASRAYELKRLEFE 158
                     89*******9.**********55.....45**********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.32E-24109166No hitNo description
PfamPF008472.0E-12109159IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-17109158IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.6E-22110159IPR001471AP2/ERF domain
SMARTSM003801.3E-20110174IPR001471AP2/ERF domain
PROSITE profilePS5103220.112110168IPR001471AP2/ERF domain
PRINTSPR003671.9E-9111122IPR001471AP2/ERF domain
PRINTSPR003671.9E-9133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MFEPERLFSS DLENLKRNIK EKADTDRKMR KIRIVCYDPD ATDSSDDEGI NYPKSKHFVR  60
EIKLQIGNSF STPKTSETEC SFQDSNNGEK KPKNKALAKP LIQPRQGLSK YKGVRQRKWG  120
KWAAEIRDPF KGRRVWLGTY STAKEASRAY ELKRLEFERM TKNSTNVSEK SSDDQNQTNT  180
NVASVSEDSA ESSASHTSHS LPSSVLELDS LTSASASTPI SGHNDNEKAS NVALEANVLE  240
QEVPELALME ETLSLAQIGE TMDLELALMI SVSIWMSLLS MILRTLRFV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-121091511356Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016451267.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1S3YH470.0A0A1S3YH47_TOBAC; ethylene-responsive transcription factor ERF118-like
STRINGXP_009767276.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-23ERF family protein