PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016451222.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 327aa    MW: 36565.5 Da    PI: 9.1925
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016451222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.46.3e-082442821755
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                     A+rsR RK+++i eLe+ v++L+ae ++   ele l+++
  XP_016451222.1 244 AQRSRVRKLQYISELERNVQALQAEGSEVSAELEFLNQQ 282
                     89*******************************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0019233292IPR004827Basic-leucine zipper domain
CDDcd147031.24E-16235282No hitNo description
SuperFamilySSF579591.13E-5244286No hitNo description
Gene3DG3DSA:1.20.5.1707.9E-8244282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MANSKGASSM RNMVYNGKSS LLPPKSPFPS ISPSYVDYVP SSAVTQKGIS KSRDGSHHQR  60
TSSESCLIEE QPSWLDDLLN EPETPVRRGG HRRSSSDSFT YHDAANIANL DYIAQDDNKF  120
RNLTPVPSWG SQDFDYYKDA RHATFHVDQN FSNRQKNRAR DASPNAIQHP RGRPPFRENV  180
KTHSLGASCP PQEGERPKSA GSDKQDLVES VPPNPVGSGE KKDSSHSKSS ASESDTKRAK  240
QQFAQRSRVR KLQYISELER NVQALQAEGS EVSAELEFLN QQSLILSMEN KALKQRLENL  300
AQEQLIKYCK FLLYLSYFIV VSAISSA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754490.0HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016451222.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_016451224.10.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLA0A1S3YH000.0A0A1S3YH00_TOBAC; uncharacterized protein At4g06598-like
STRINGXP_009596001.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.28e-70bZIP family protein