PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016450251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Dof | ||||||||
Protein Properties | Length: 283aa MW: 30389.3 Da PI: 10.1538 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.9 | 4e-37 | 35 | 91 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGggrrk k + XP_016450251.1 35 PQKCPRCDSNNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGTLRNVPVGGGRRKGKCT 91 689**************************************************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 5.0E-20 | 5 | 81 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.1E-31 | 36 | 89 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.23 | 36 | 90 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 38 | 74 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MEQGRSGGEN DRNQQRKMKM PENLSAVAQP PQPPPQKCPR CDSNNTKFCY YNNYSLTQPR 60 YFCKTCRRYW TQGGTLRNVP VGGGRRKGKC TTRGGGGSSS LSAGESSSRS SQGAQPPPVV 120 PLNMTTNLSA AAAFFSGNSI SRSQPLNSLY SSGGFLSSLA AMQSQGVNQS SNSQFGGTGN 180 TVLLQGFHNL PKEPQQSGFY QMVNKEKSNE SSFYLSDQTL QFQHTRPLGS WTQRFINNNN 240 NMDSWNSSAG SSSGSGGATN STTAGSSLSP NQWPDMPGFG PSP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016450251.1 | 0.0 | PREDICTED: dof zinc finger protein DOF3.1-like | ||||
TrEMBL | A0A1S3YDD1 | 0.0 | A0A1S3YDD1_TOBAC; dof zinc finger protein DOF3.1-like | ||||
STRING | XP_009623142.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 2e-26 | TARGET OF MONOPTEROS 6 |