PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016448792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 121aa MW: 14043.4 Da PI: 5.0513 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 35.1 | 3e-11 | 63 | 87 | 2 | 26 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 prlrWtp+LH +Fv+a+e+LGG+e+ XP_016448792.1 63 PRLRWTPDLHLSFVRAIERLGGQEN 87 8*********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.9E-9 | 59 | 86 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MEKVSYSIDL NEEANNKRET DETIELSDDM IEKTAEGNSS SEDIGNYENK SSRVRQYVRS 60 KLPRLRWTPD LHLSFVRAIE RLGGQENDEC ERTQHCPCKK SSADVSKQET WRVWTSTRPC 120 S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016448792.1 | 1e-85 | PREDICTED: uncharacterized protein LOC107773880 isoform X2 | ||||
TrEMBL | A0A1S3Y9Y8 | 3e-84 | A0A1S3Y9Y8_TOBAC; uncharacterized protein LOC107773880 isoform X2 | ||||
STRING | XP_009607761.1 | 7e-53 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 4e-17 | G2-like family protein |