PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016448543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Dof | ||||||||
Protein Properties | Length: 356aa MW: 38490.1 Da PI: 8.2222 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.6 | 3.1e-39 | 27 | 86 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e +l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk + XP_016448543.1 27 EPSLNCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 86 56789****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 3.6E-33 | 29 | 84 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 3.0E-27 | 30 | 84 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.422 | 30 | 84 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 32 | 68 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010052 | Biological Process | guard cell differentiation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence Send to blast |
MTSPDNKEES QSSGGGGRKT SAARPQEPSL NCPRCDSPNT KFCYYNNYSL SQPRHFCKTC 60 RRYWTKGGAL RNVPIGGGCR KNKKIKTSSS SRLSGDSKDT SVSSDIGGLK FFHGLSPAMD 120 FQLGGLNFPR LSSNTSTSGS IFNQFSSFGD ISTTSAAAIG SSSCFSLDPS GSCSGSLLGF 180 NNFPFSSSML KQGNAGAQEM GSMGIHHGTM ASSIESLSSI NQDLHWKLQQ QRLAMLFGGD 240 QNQKENIVSS HIPHLDQNQI QKPQPILFQN LDISSKQQEE EAAVFGNNIN SRKDHGSGSD 300 HGNNNLATEW FFDNSFGTVN PTSTNSSSGN ANDQNNNNNW NSIQAWSNLN QYSTLP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016448543.1 | 0.0 | PREDICTED: dof zinc finger protein DOF5.7 | ||||
TrEMBL | A0A1S3Y991 | 0.0 | A0A1S3Y991_TOBAC; dof zinc finger protein DOF5.7 | ||||
STRING | XP_009774290.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5242 | 22 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 1e-55 | Dof family protein |