PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016447462.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 465aa    MW: 51996.2 Da    PI: 8.1337
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016447462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-1852102155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+WvAeIr+p   + r  r++lg+f ta +Aa a+++ + +++g
  XP_016447462.1  52 CKYRGVRQRT-WGKWVAEIREP---N-RgSRIWLGTFSTALDAALAYDEVAISMYG 102
                     79*****999.**********8...3.35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.47E-3052111No hitNo description
PfamPF008476.7E-1252102IPR001471AP2/ERF domain
PROSITE profilePS5103221.03553110IPR001471AP2/ERF domain
SMARTSM003801.3E-3453116IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1953111IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.3E-3053111IPR001471AP2/ERF domain
PRINTSPR003671.9E-95465IPR001471AP2/ERF domain
PRINTSPR003671.9E-97692IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MKKPMNGRMP SRNLLARWKE QNTSLDSMRK APAKGSKKGC MKGKGGPDNQ NCKYRGVRQR  60
TWGKWVAEIR EPNRGSRIWL GTFSTALDAA LAYDEVAISM YGSRARLNLP NYISPNMSLS  120
APSNLDCVST ITSTHSEMTI DVHSGEKGCS SISGYCIESK NVATHGYCLD KLPRSFNFIH  180
WVCEDCKSRE CQECAGIRSN LFSSSGVEAN VGPKLKRKVN PTLGDECIHE AMEDILEINP  240
AKELKPLTGL SDVVDYGSPL DVNKVTDCTD MKNGIMNISQ SNHGGKLNLG GNKYQGNCSN  300
IFSGDVHQST TDYLQYALLP ESHQCAEPVI NPTWSGSFNI LNGDHGTLDG IVARISSRAC  360
KKVYDEACFF PSTLQLEIVP KSIVWPKNFL RSEPSDDIIA LYFFPKDARD VAKFDDLVDE  420
MIHQRLAMRT VVKNAELLVF TSMDLPRRHW RFQGKHYLWG VFREE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2054110360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016447448.10.0PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X1
TrEMBLA0A1S3Y5C10.0A0A1S3Y5C1_TOBAC; dehydration-responsive element-binding protein 2B-like isoform X1
STRINGXP_009776426.10.0(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.26e-32DRE-binding protein 2A