PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016446450.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 328aa    MW: 36752.7 Da    PI: 4.4785
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016446450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-18112159253
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     +y+GVr++k +g+W+AeIrd +     + +r++lg++ taeeA  a++  r+++
  XP_016446450.1 112 KYRGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYNTAEEASLAYETKRLEF 159
                     8*******9.**********55.....45*******************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.11E-17112167IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-22112161IPR001471AP2/ERF domain
PfamPF008474.2E-12112159IPR001471AP2/ERF domain
PROSITE profilePS5103220.086112169IPR001471AP2/ERF domain
CDDcd000183.83E-24112152No hitNo description
SMARTSM003801.0E-18112166IPR001471AP2/ERF domain
PRINTSPR003674.1E-10113124IPR001471AP2/ERF domain
PRINTSPR003674.1E-10135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MFEPQKQPQK SKNRVETGQP MRKIRIVCND PDATDSSDDE RVNDIKPKLK RFVREITLPI  60
GNISPKKSKV KIPVETTESS CQDSNNGEKN PKKKRVLAKT PSSNQQRLSP GKYRGVRQRK  120
WGKWAAEIRD PFKGRRVWLG TYNTAEEASL AYETKRLEFD SMAKNNNISS SNVSEKSSNN  180
EENSAESLVS HTSHTSPESV LEMDSLTSTS EVNDKRPDEK AKDELGLMED SLSLAEIGAG  240
IEFDVEMDLF FAGSDDFGQN LDDFVVNDFE DLPIYGLEGD EQLPTGLPDF DFDFDFDGYN  300
ESCAWMDEVT AAPLMNGTTT PLNIALCP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-15113153344ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016446449.10.0PREDICTED: ethylene-responsive transcription factor ERF119-like
RefseqXP_016446450.10.0PREDICTED: ethylene-responsive transcription factor ERF119-like
TrEMBLA0A1S3Y2U40.0A0A1S3Y2U4_TOBAC; ethylene-responsive transcription factor ERF119-like
STRINGXP_009624644.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-29ERF family protein