PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016446377.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 371aa    MW: 42033.4 Da    PI: 9.5295
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016446377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.27.5e-082442831756
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     A+rsR RK+++i eLe+ v++L+ae ++   ele l++++
  XP_016446377.1 244 AQRSRVRKLQYISELERNVQVLQAEGSEVSAELEFLNQQS 283
                     789******************************9999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0026233292IPR004827Basic-leucine zipper domain
CDDcd147039.41E-16237282No hitNo description
Gene3DG3DSA:1.20.5.1705.2E-8244283No hitNo description
SuperFamilySSF579597.31E-6244286No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MANSKGPSSM RHMMYNGKSS LLPPKSPFPS TCPSYVDYPP SSAVTQKGIS KCRDGSHHQR  60
TSSESCLIEE QPSWLDDLLN EPETPVRRGG HRRSSSDSFT YFDAANIANL DYIAQDDNKF  120
RNITPVASWG SQDFDYYKDA RHATFHVDRN SSNQQKSRSR DASPNAKPHL RGFPPSRENV  180
KTQSLGSSFL PQEGERPKSA GSDKQDLLES VTPDPKGSGE KKDSSHSKSS ASENDMKRAK  240
QQFAQRSRVR KLQYISELER NVQVLQAEGS EVSAELEFLN QQSLILSMEN KALKQRLENL  300
AQEQMIKYLE HEVLERERGR LRALYQQQQL PQSQQQQQSS SSRRRSTSRD LDQQFANISL  360
KHKDGSGQLH M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754490.0HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016446377.10.0PREDICTED: uncharacterized protein At4g06598-like isoform X1
RefseqXP_016446378.10.0PREDICTED: uncharacterized protein At4g06598-like isoform X2
RefseqXP_016446379.10.0PREDICTED: uncharacterized protein At4g06598-like isoform X1
TrEMBLA0A1S3Y2L70.0A0A1S3Y2L7_TOBAC; uncharacterized protein At4g06598-like isoform X1
STRINGXP_009589882.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.27e-71bZIP family protein