PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_016444817.1 | ||||||||
Common Name | phi-2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 464aa MW: 51159.9 Da PI: 9.725 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.4 | 5e-11 | 386 | 441 | 5 | 59 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkevakl 59 +r +r++kNRe+A rsR RK+a++ eLe +v++L++ ++L+k+ +e ++k+ +l XP_016444817.1 386 RRRKRMIKNRESAARSRDRKQAYTLELEAEVAKLKEIKQELQKKqAEFIEKQKNQL 441 689************************************99765145555555555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-11 | 382 | 447 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.151 | 384 | 429 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.5E-12 | 384 | 441 | No hit | No description |
CDD | cd14707 | 1.21E-22 | 386 | 440 | No hit | No description |
Pfam | PF00170 | 3.1E-9 | 386 | 444 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.29E-9 | 386 | 434 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 389 | 404 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 464 aa Download sequence Send to blast |
MQYCLLVNIL IYLLGLHQNI KNESHGQLLP DLLLLLRVLR LNFLTRFYSP LPSHTMGSYL 60 NFKNFADTSQ PESSGGKPMN NDNFSLARQS SIYSFTFDEL QSTCGLGKDF GSMNMDDLLK 120 NIWTAEESQA LSSSVAGGNV SVPVGNLQRQ GSLTLPRTIS QKTVDEVWKD FQKETVNAND 180 GSAPGASNFG QRQSTLGEMT LEEFLVRAGA VREDMQPTRY SKDVTFTSGF TQPSSNNSSL 240 TIAFQQATQN PQQLSNQIAG NNIFNVVTTT SSQQKPQQAQ PLFPKQTTVA FASPMQLGNT 300 AQLASPGTRA PIVGMSNPSV NTTIIQGSIM QGGVMDMAGL HNGVTSVKGG SPGNLDPPSL 360 SPSPYACGEG GRGRRSCTSF EKVVERRRKR MIKNRESAAR SRDRKQAYTL ELEAEVAKLK 420 EIKQELQKKQ AEFIEKQKNQ LLEKMNMPWE NKLICLRRTV TGPW |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AB063648 | 0.0 | AB063648.1 Nicotiana tabacum mRNA for phi-2, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | NP_001311979.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 4 | ||||
Swissprot | Q9M7Q3 | 7e-98 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A1S3XYM7 | 0.0 | A0A1S3XYM7_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X2 | ||||
STRING | XP_009791697.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34000.2 | 1e-84 | abscisic acid responsive elements-binding factor 3 |