PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016443388.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 186aa MW: 21745.8 Da PI: 10.1536 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 83.3 | 2.5e-26 | 88 | 142 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt+eLHe+Fv+av++LGG+ +A P++i++ m+v +tl+h+kSHLQkY++ XP_016443388.1 88 KPRMKWTEELHESFVNAVAELGGAWEAKPRAIKRKMQVTAITLYHIKSHLQKYKM 142 79***************************************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 4.12E-14 | 87 | 145 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.1E-21 | 88 | 142 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 7.2E-24 | 88 | 143 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.4E-8 | 90 | 141 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MFPLVPFAMN DNSRQYRRIP ILDRQFQEQL NPLPLNNLQG SLANQSHQPL RFLGKLNVMN 60 NYDDNNLRFF DVNVPQVEQE VDQPRLVKPR MKWTEELHES FVNAVAELGG AWEAKPRAIK 120 RKMQVTAITL YHIKSHLQKY KMAQEPDGAR RRKAMSILAF RFFFFLPLTS TTHFALLDSX 180 LDAIDN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-17 | 88 | 144 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-17 | 88 | 144 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-17 | 88 | 144 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-17 | 88 | 144 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-17 | 88 | 144 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016443388.1 | 1e-135 | PREDICTED: probable transcription factor KAN4 | ||||
TrEMBL | A0A1S3XTW6 | 1e-134 | A0A1S3XTW6_TOBAC; probable transcription factor KAN4 | ||||
STRING | XP_009620178.1 | 1e-111 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15338 | 5 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12730.1 | 3e-20 | G2-like family protein |