PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016440586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Nin-like | ||||||||
Protein Properties | Length: 839aa MW: 94531.1 Da PI: 5.4063 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 50.5 | 4.2e-16 | 661 | 705 | 4 | 48 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is ++l+++F +++ dAAk+Lgv T+LKr CR + I RWP+ k XP_016440586.1 661 GISRSVLEEQFGKKLSDAAKDLGVARTTLKRMCRDNDIYRWPRCK 705 6999**************************************855 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 11.524 | 646 | 731 | IPR003035 | RWP-RK domain |
Gene3D | G3DSA:1.10.10.60 | 7.0E-4 | 647 | 694 | IPR009057 | Homeodomain-like |
Pfam | PF02042 | 3.4E-13 | 662 | 704 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 3.27E-15 | 750 | 836 | No hit | No description |
PROSITE profile | PS51745 | 16.169 | 756 | 839 | IPR000270 | PB1 domain |
SMART | SM00666 | 1.6E-11 | 756 | 838 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 8.0E-14 | 758 | 836 | No hit | No description |
Pfam | PF00564 | 1.1E-12 | 758 | 837 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 839 aa Download sequence Send to blast |
MPVELKFSYR KEGDGINRWV FWTNRNGEEL NHIKSLFQFL RDSTHTDTNG DSQINRLTTK 60 NLVELLDVQG TCLIQFWAPI RINGGQTFLT TADQPFALNG KIHEGLWAYR RVCLHTIASV 120 DTTDITAAKR IHVHGRPARV FRSGMPEFSP HVRYYYMGEY PLRNFAMCLG VGSYWTVPVF 180 EGSGDRCIGV LEYAFDANEG LDICSILDRF INNHRILKTM GLALIPSWLA CPQEIQEVSE 240 QELAKVKEVL EVTCKTHKLL FAQTWIPVLD SSRTEMLITS APTKYCSEEI TSLEFLAVSD 300 LHHVRTGQGL VGKVFSSKGS CFCRDITQLS IDFYPLVPIA RSARFTACFA IFVRLKNASR 360 MVLEFFLPRD ETLDGNPQSF LSKLLATIGE QLPSFSLDSG PSFFVEVIGT ALVDGLDFFE 420 ISQPQPVIEP KGNKKVMHFD SLNQESADLG SSSSTDIAAH SMETTKDTPG IHGIAISQKI 480 LELENKEESV LLNSAHQQGV EEADAVDKER NFLNFKENEV SYTDSDIFAT FIVDPEQNLQ 540 KNLSIIEASL DEELEYFDIG QHQLPLMVKY DTLNQLSDID PLSSSDFEEI ITVDYGWDAR 600 MNLQSKDKGE TTQPDLAYQQ RGEAADVADK QRHSLHVKES TNSHNCPEKH KRIKRIEKEY 660 GISRSVLEEQ FGKKLSDAAK DLGVARTTLK RMCRDNDIYR WPRCKSATDV CSVSESKPVK 720 GVEKQSVNSS QEDLQPHATL TDQRKKPTAA FQSDNAMSVK VTCKDVTVKF PLSLSSGKID 780 LEAEIKKRLR IPIGSCSIKY EDEDNDWIAI TCDSDLEYGI HTLRSLGRTT MKMLVEPLN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016440586.1 | 0.0 | PREDICTED: protein NLP7-like isoform X1 | ||||
TrEMBL | A0A1S3XKX9 | 0.0 | A0A1S3XKX9_TOBAC; protein NLP7-like isoform X1 | ||||
STRING | XP_009783714.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13981 | 7 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 2e-42 | NIN like protein 7 |