PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016439922.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family EIL
Protein Properties Length: 496aa    MW: 56768.1 Da    PI: 4.855
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016439922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3395.38.2e-121323661353
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     ++lk+rmwkdqmll++lk+++ ++  +ke+  +++++ k +eq+rrkk+sraQD+iL YM+k+mevc  qGfv+gi+pekgk+v+g+sdsLr+WW
  XP_016439922.1  32 DDLKRRMWKDQMLLQKLKSMRSSS--KKESIDDESQQAKAQEQSRRKKTSRAQDSILMYMVKIMEVCGGQGFVFGIVPEKGKLVTGSSDSLRGWW 124
                     79******************9985..477778899999********************************************************* PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskd 189
                     kekv+f++n+p+ai++  +  l++++e++    +ss+ h l+elqD+tlgSLLsalmqhc ppqr fple+g++pPWWPtGkelww  +g l+ +
  XP_016439922.1 125 KEKVKFEKNAPIAIAECLPGLLVQQQENDILDPSSSYMHLLEELQDATLGSLLSALMQHCIPPQRTFPLERGLSPPWWPTGKELWWRDQGlLALE 219
                     *****************99999999999886669999*****************************************************9999* PP

                     --.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXX..X CS
            EIN3 190 qgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqk..e 282
                     qg+ppy+kphdl kawkvsvL+avikhmsp++ ++r+l+ +sk+lq+km+ake+ ++++v+nqe+++++        l   ++++++s+e++  e
  XP_016439922.1 220 QGPPPYRKPHDLNKAWKVSVLAAVIKHMSPDLGRMRRLVIKSKSLQNKMTAKETSTWCKVVNQEQALLE--------L--TQRALKISEEEDdkE 304
                     ****************************************************************99772........3..444555555544003 PP

                     XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 283 dvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                     d+   + s  ++ +            krk++++++a+ ++++v + cq+ ++ +s   l+f dkns+ ++e
  XP_016439922.1 305 DNLAFDGST-STLR--------RNDMKRKSNFEHRAMNMEQDVFYACQNLNCAQSGLGLGFVDKNSRIEHE 366
                     333333333.2222........234588889999999999***************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.6E-11132283No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-63158288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.01E-56162286IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MMQFEEMTEP LSPIGEVEEP EEEENEEVIS YDDLKRRMWK DQMLLQKLKS MRSSSKKESI  60
DDESQQAKAQ EQSRRKKTSR AQDSILMYMV KIMEVCGGQG FVFGIVPEKG KLVTGSSDSL  120
RGWWKEKVKF EKNAPIAIAE CLPGLLVQQQ ENDILDPSSS YMHLLEELQD ATLGSLLSAL  180
MQHCIPPQRT FPLERGLSPP WWPTGKELWW RDQGLLALEQ GPPPYRKPHD LNKAWKVSVL  240
AAVIKHMSPD LGRMRRLVIK SKSLQNKMTA KETSTWCKVV NQEQALLELT QRALKISEEE  300
DDKEDNLAFD GSTSTLRRND MKRKSNFEHR AMNMEQDVFY ACQNLNCAQS GLGLGFVDKN  360
SRIEHEISCS HRDDQQRLNL SINSTTFSSL INEAQLKPHE ESIFGREGEI IFQQDLMNNM  420
EVERSSVNCH TQISDAVLEN LKNFWGDNNV VLEQLDYDLT TNGNMNSNGT PSQDVDLNHD  480
AATCIWDLAY DDRFKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-551602861126Protein ETHYLENE INSENSITIVE 3
4zds_B7e-551602861126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016439922.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1
SwissprotQ9LX161e-128EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1S3XJS70.0A0A1S3XJS7_TOBAC; putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1
STRINGXP_009780539.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-127EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]